The structure and regulation of human muscle α-actinin.
Ribeiro Euripedes de Almeida, Pinotsis Nikos, Ghisleni Andrea, Salmazo Anita, Konarev Petr V, Kostan Julius, Sjöblom Björn, Schreiner Claudia, Polyansky Anton A, Gkougkoulia Eirini A, Holt Mark R, Aachmann Finn L, Zagrović Bojan, Bordignon Enrica, Pirker Katharina F, Svergun Dmitri I, Gautel Mathias, Djinović-Carugo Kristina
On the Contribution of Protein Spatial Organization to the Physicochemical Interconnection between Proteins and Their Cognate mRNAs.
Beier Andreas, Zagrovic Bojan, Polyansky Anton A
Computational analysis of amino acids and their sidechain analogs in crowded solutions of RNA nucleobases with implications for the mRNA-protein complementarity hypothesis.
Hajnic Matea, Osorio Juan Iregui, Zagrovic Bojan
Are current atomistic force fields accurate enough to study proteins in crowded environments?
Petrov Drazen, Zagrovic Bojan
Dependence of protein crystal stability on residue charge states and ion content of crystal solvent.
Kuzmanic Antonija, Zagrovic Bojan
X-ray refinement significantly underestimates the level of microscopic heterogeneity in biomolecular crystals.
Kuzmanic Antonija, Pannu Navraj S, Zagrovic Bojan
Of RNA-binding proteins and their targets: interaction determines expression.
Zagrovic Bojan
Analogue encoding of physicochemical properties of proteins in their cognate messenger RNAs.
Polyansky Anton A, Hlevnjak Mario, Zagrovic Bojan
Proteome-wide analysis reveals clues of complementary interactions between mRNAs and their cognate proteins as the physicochemical foundation of the genetic code.
Polyansky Anton A, Hlevnjak Mario, Zagrovic Bojan
A systematic framework for molecular dynamics simulations of protein post-translational modifications.
Petrov Drazen, Margreitter Christian, Grandits Melanie, Oostenbrink Chris, Zagrovic Bojan
Evidence of direct complementary interactions between messenger RNAs and their cognate proteins.
Polyansky Anton A, Zagrovic Bojan
Vienna-PTM web server: a toolkit for MD simulations of protein post-translational modifications.
Margreitter Christian, Petrov Drazen, Zagrovic Bojan
On the Contribution of Linear Correlations to Quasi-harmonic Conformational Entropy in Proteins.
Polyansky Anton A, Kuzmanic Antonija, Hlevnjak Mario, Zagrovic Bojan
Protein Electrostatic Properties Predefining the Level of Surface Hydrophobicity Change upon Phosphorylation.
Polyansky Anton A, Zagrovic Bojan
Sequence signatures of direct complementarity between mRNAs and cognate proteins on multiple levels.
Hlevnjak Mario, Polyansky Anton A, Zagrovic Bojan
Estimation of conformational entropy in protein-ligand interactions: a computational perspective.
Polyansky Anton A, Zubac Ruben, Zagrovic Bojan
Mechanism and thermodynamics of ligand binding to auxin amidohydrolase.
Simunovic Mijo, Zagrovic Bojan, Tomić Sanja
Dynamics may significantly influence the estimation of interatomic distances in biomolecular X-ray structures.
Kuzmanic Antonija, Kruschel Daniela, van Gunsteren Wilfred F, Pannu Navraj S, Zagrovic Bojan
Microscopic analysis of protein oxidative damage: effect of carbonylation on structure, dynamics, and aggregability of villin headpiece.
Petrov Drazen, Zagrovic Bojan