Unifying the global phylogeny and environmental distribution of ammonia-oxidising archaea based on amoA genes.
Alves Ricardo J Eloy, Minh Bui Quang, Urich Tim, von Haeseler Arndt, Schleper Christa
SLAM-seq defines direct gene-regulatory functions of the BRD4-MYC axis.
Muhar Matthias, Ebert Anja, Neumann Tobias, Umkehrer Christian, Jude Julian, Wieshofer Corinna, Rescheneder Philipp, Lipp Jesse J, Herzog Veronika A, Reichholf Brian, Cisneros David A, Hoffmann Thomas, Schlapansky Moritz F, Bhat Pooja, von Haeseler Arndt, Köcher Thomas, Obenauf Anna C, Popow Johannes, Ameres Stefan L, Zuber Johannes
Germline Variants in the POT1-Gene in High-Risk Melanoma Patients in Austria.
Müller Christoph, Krunic Milica, Wendt Judith, von Haeseler Arndt, Okamoto Ichiro
MPBoot: fast phylogenetic maximum parsimony tree inference and bootstrap approximation.
Hoang Diep Thi, Vinh Le Sy, Flouri Tomáš, Stamatakis Alexandros, von Haeseler Arndt, Minh Bui Quang
Complex Models of Sequence Evolution Require Accurate Estimators as Exemplified with the Invariable Site Plus Gamma Model.
Nguyen Lam-Tung, von Haeseler Arndt, Minh Bui Quang
UFBoot2: Improving the Ultrafast Bootstrap Approximation.
Hoang Diep Thi, Chernomor Olga, von Haeseler Arndt, Minh Bui Quang, Vinh Le Sy
Thiol-linked alkylation of RNA to assess expression dynamics.
Herzog Veronika A, Reichholf Brian, Neumann Tobias, Rescheneder Philipp, Bhat Pooja, Burkard Thomas R, Wlotzka Wiebke, von Haeseler Arndt, Zuber Johannes, Ameres Stefan L
HIV-1 full-genome phylogenetics of generalized epidemics in sub-Saharan Africa: impact of missing nucleotide characters in next-generation sequences.
Ratmann Oliver, Wymant Chris, Colijn Caroline, Danaviah Siva, Essex M, Frost Simon D W, Gall Astrid, Gaiseitsiwe Simani, Grabowski Mary, Gray Ronald, Guindon Stephane, von Haeseler Arndt, Kaleebu Pontiano, Kendall Michelle, Kozlov Alexey, Manasa Justen, Minh Bui Quang, Moyo Sikhulile, Novitsky Vladimir, Nsubuga Rebecca, Pillay Sureshnee, Quinn Thomas C, Serwadda David, Ssemwanga Deogratius, Stamatakis Alexandros, Trifinopoulos Jana, Wawer Maria, Leigh Brown Andrew, de Oliveira Tulio, Kellam Paul, Pillay Deenan, Fraser Christophe
ModelFinder: fast model selection for accurate phylogenetic estimates.
Kalyaanamoorthy Subha, Minh Bui Quang, Wong Thomas K F, von Haeseler Arndt, Jermiin Lars S
An Enumerative Combinatorics Model for Fragmentation Patterns in RNA Sequencing Provides Insights into Nonuniformity of the Expected Fragment Starting-Point and Coverage Profile.
Prakash Celine, Haeseler Arndt Von
The genomic basis of circadian and circalunar timing adaptations in a midge.
Kaiser Tobias S, Poehn Birgit, Szkiba David, Preussner Marco, Sedlazeck Fritz J, Zrim Alexander, Neumann Tobias, Nguyen Lam-Tung, Betancourt Andrea J, Hummel Thomas, Vogel Heiko, Dorner Silke, Heyd Florian, von Haeseler Arndt, Tessmar-Raible Kristin
Reversible polymorphism-aware phylogenetic models and their application to tree inference.
Schrempf Dominik, Minh Bui Quang, De Maio Nicola, von Haeseler Arndt, Kosiol Carolin
Next-generation sequencing diagnostics of bacteremia in septic patients.
Grumaz Silke, Stevens Philip, Grumaz Christian, Decker Sebastian O, Weigand Markus A, Hofer Stefan, Brenner Thorsten, von Haeseler Arndt, Sohn Kai
Terrace Aware Data Structure for Phylogenomic Inference from Supermatrices.
Chernomor Olga, von Haeseler Arndt, Minh Bui Quang
W-IQ-TREE: a fast online phylogenetic tool for maximum likelihood analysis.
Trifinopoulos Jana, Nguyen Lam-Tung, von Haeseler Arndt, Minh Bui Quang
Separable Roles for a Caenorhabditis elegans RMI1 Homolog in Promoting and Antagonizing Meiotic Crossovers Ensure Faithful Chromosome Inheritance.
Jagut Marlène, Hamminger Patricia, Woglar Alexander, Millonigg Sophia, Paulin Luis, Mikl Martin, Dello Stritto Maria Rosaria, Tang Lois, Habacher Cornelia, Tam Angela, Gallach Miguel, von Haeseler Arndt, Villeneuve Anne M, Jantsch Verena
A-type lamins bind both hetero- and euchromatin, the latter being regulated by lamina-associated polypeptide 2 alpha.
Gesson Kevin, Rescheneder Philipp, Skoruppa Michael P, von Haeseler Arndt, Dechat Thomas, Foisner Roland
Teaser: Individualized benchmarking and optimization of read mapping results for NGS data.
Smolka Moritz, Rescheneder Philipp, Schatz Michael C, von Haeseler Arndt, Sedlazeck Fritz J
The Candida albicans Histone Acetyltransferase Hat1 Regulates Stress Resistance and Virulence via Distinct Chromatin Assembly Pathways.
Tscherner Michael, Zwolanek Florian, Jenull Sabrina, Sedlazeck Fritz J, Petryshyn Andriy, Frohner Ingrid E, Mavrianos John, Chauhan Neeraj, von Haeseler Arndt, Kuchler Karl
Consequences of Common Topological Rearrangements for Partition Trees in Phylogenomic Inference.
Chernomor Olga, Minh Bui Quang, von Haeseler Arndt