Split diversity in constrained conservation prioritization using integer linear programming.
Chernomor Olga, Minh Bui Quang, Forest Félix, Klaere Steffen, Ingram Travis, Henzinger Monika, von Haeseler Arndt
Decreased expression of endogenous feline leukemia virus in cat lymphomas: a case control study.
Krunic Milica, Ertl Reinhard, Hagen Benedikt, Sedlazeck Fritz J, Hofmann-Lehmann Regina, von Haeseler Arndt, Klein Dieter
Innate immune response to Streptococcus pyogenes depends on the combined activation of TLR13 and TLR2.
Fieber Christina, Janos Marton, Koestler Tina, Gratz Nina, Li Xiao-Dong, Castiglia Virginia, Aberle Marion, Sauert Martina, Wegner Mareike, Alexopoulou Lena, Kirschning Carsten J, Chen Zhijian J, von Haeseler Arndt, Kovarik Pavel
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies.
Nguyen Lam-Tung, Schmidt Heiko A, von Haeseler Arndt, Minh Bui Quang
The phylogenetic likelihood library.
Flouri T, Izquierdo-Carrasco F, Darriba D, Aberer A J, Nguyen L-T, Minh B Q, Von Haeseler A, Stamatakis A
The first myriapod genome sequence reveals conservative arthropod gene content and genome organisation in the centipede Strigamia maritima.
Chipman Ariel D, Ferrier David E K, Brena Carlo, Qu Jiaxin, Hughes Daniel S T, Schröder Reinhard, Torres-Oliva Montserrat, Znassi Nadia, Jiang Huaiyang, Almeida Francisca C, Alonso Claudio R, Apostolou Zivkos, Aqrawi Peshtewani, Arthur Wallace, Barna Jennifer C J, Blankenburg Kerstin P, Brites Daniela, Capella-Gutiérrez Salvador, Coyle Marcus, Dearden Peter K, Du Pasquier Louis, Duncan Elizabeth J, Ebert Dieter, Eibner Cornelius, Erikson Galina, Evans Peter D, Extavour Cassandra G, Francisco Liezl, Gabaldón Toni, Gillis William J, Goodwin-Horn Elizabeth A, Green Jack E, Griffiths-Jones Sam, Grimmelikhuijzen Cornelis J P, Gubbala Sai, Guigó Roderic, Han Yi, Hauser Frank, Havlak Paul, Hayden Luke, Helbing Sophie, Holder Michael, Hui Jerome H L, Hunn Julia P, Hunnekuhl Vera S, Jackson LaRonda, Javaid Mehwish, Jhangiani Shalini N, Jiggins Francis M, Jones Tamsin E, Kaiser Tobias S, Kalra Divya, Kenny Nathan J, Korchina Viktoriya, Kovar Christie L, Kraus F Bernhard, Lapraz François, Lee Sandra L, Lv Jie, Mandapat Christigale, Manning Gerard, Mariotti Marco, Mata Robert, Mathew Tittu, Neumann Tobias, Newsham Irene, Ngo Dinh N, Ninova Maria, Okwuonu Geoffrey, Ongeri Fiona, Palmer William J, Patil Shobha, Patraquim Pedro, Pham Christopher, Pu Ling-Ling, Putman Nicholas H, Rabouille Catherine, Ramos Olivia Mendivil, Rhodes Adelaide C, Robertson Helen E, Robertson Hugh M, Ronshaugen Matthew, Rozas Julio, Saada Nehad, Sánchez-Gracia Alejandro, Scherer Steven E, Schurko Andrew M, Siggens Kenneth W, Simmons DeNard, Stief Anna, Stolle Eckart, Telford Maximilian J, Tessmar-Raible Kristin, Thornton Rebecca, van der Zee Maurijn, von Haeseler Arndt, Williams James M, Willis Judith H, Wu Yuanqing, Zou Xiaoyan, Lawson Daniel, Muzny Donna M, Worley Kim C, Gibbs Richard A, Akam Michael, Richards Stephen
ADAR2 induces reproducible changes in sequence and abundance of mature microRNAs in the mouse brain.
Vesely Cornelia, Tauber Stefanie, Sedlazeck Fritz J, Tajaddod Mansoureh, von Haeseler Arndt, Jantsch Michael F
A SAGE based approach to human glomerular endothelium: defining the transcriptome, finding a novel molecule and highlighting endothelial diversity.
Sengoelge Guerkan, Winnicki Wolfgang, Kupczok Anne, von Haeseler Arndt, Schuster Michael, Pfaller Walter, Jennings Paul, Weltermann Ansgar, Blake Sophia, Sunder-Plassmann Gere
SNP2GO: functional analysis of genome-wide association studies.
Szkiba David, Kapun Martin, von Haeseler Arndt, Gallach Miguel
The evolution of the ribosome biogenesis pathway from a yeast perspective.
Ebersberger Ingo, Simm Stefan, Leisegang Matthias S, Schmitzberger Peter, Mirus Oliver, von Haeseler Arndt, Bohnsack Markus T, Schleiff Enrico
Decisive data sets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects.
Dell'Ampio Emiliano, Meusemann Karen, Szucsich Nikolaus U, Peters Ralph S, Meyer Benjamin, Borner Janus, Petersen Malte, Aberer Andre J, Stamatakis Alexandros, Walzl Manfred G, Minh Bui Quang, von Haeseler Arndt, Ebersberger Ingo, Pass Günther, Misof Bernhard
NextGenMap: fast and accurate read mapping in highly polymorphic genomes.
Sedlazeck Fritz J, Rescheneder Philipp, von Haeseler Arndt
Exploring the sampling universe of RNA-seq.
Tauber Stefanie, von Haeseler Arndt
Ultrafast approximation for phylogenetic bootstrap.
Minh Bui Quang, Nguyen Minh Anh Thi, von Haeseler Arndt
Benefit-of-doubt (BOD) scoring: a sequencing-based method for SNP candidate assessment from high to medium read number data sets.
Sedlazeck Fritz Joachim, Talloji Prabhavathi, von Haeseler Arndt, Bachmair Andreas
NGC: lossless and lossy compression of aligned high-throughput sequencing data.
Popitsch Niko, von Haeseler Arndt
Advanced methylome analysis after bisulfite deep sequencing: an example in Arabidopsis.
Dinh Huy Q, Dubin Manu, Sedlazeck Fritz J, Lettner Nicole, Mittelsten Scheid Ortrun, von Haeseler Arndt
Identification of an ancient haemophilia A splice site mutation.
Reitter-Pfoertner Sylvia, von Haeseler Arndt, Horvath Birgit, Sunder-Plassmann Raute, Tiedje Vera, Pabinger Ingrid, Mannhalter Christine
REvolver: modeling sequence evolution under domain constraints.
Koestler Tina, von Haeseler Arndt, Ebersberger Ingo