On a mechanistic impact of transmembrane tetramerization in the pathological activation of RTKs.
Polyansky, Anton A; Efremov, Roman G
Coding From Binding? Molecular Interactions at the Heart of Translation.
Zagrovic, Bojan; Adlhart, Marlene; Kapral, Thomas H
The SPOC domain is a phosphoserine binding module that bridges transcription machinery with co- and post-transcriptional regulators.
Appel, Lisa-Marie; Franke, Vedran; Benedum, Johannes; Grishkovskaya, Irina; Strobl, Xué; Polyansky, Anton; Ammann, Gregor; Platzer, Sebastian; Neudolt, Andrea; Wunder, Anna; Walch, Lena; Kaiser, Stefanie; Zagrovic, Bojan; Djinovic-Carugo, Kristina; Akalin, Altuna; Slade, Dea
Interaction preferences between protein side chains and key epigenetic modifications 5-methylcytosine, 5-hydroxymethycytosine and N6-methyladenine
Hajnic, Matea; Alonso-Gil, Santiago; Polyansky, Anton A; de Ruiter, Anita; Zagrovic, Bojan
Widespread autogenous mRNA-protein interactions detected by CLIP-seq.
Kapral, Thomas H; Farnhammer, Fiona; Zhao, Weihao; Lu, Zhi J; Zagrovic, Bojan
FIBCD1 is an endocytic GAG receptor associated with a novel neurodevelopmental disorder.
Fell, Christopher W; Hagelkruys, Astrid; Cicvaric, Ana; Horrer, Marion; Liu, Lucy; Li, Joshua Shing Shun; Stadlmann, Johannes; Polyansky, Anton A; Mereiter, Stefan; Tejada, Miguel Angel; Kokotovi?, Tomislav; Achuta, Venkat Swaroop; Scaramuzza, Angelica; Twyman, Kimberly A; Morrow, Michelle M; Juusola, Jane; Yan, Huifang; Wang, Jingmin; Burmeister, Margit; Choudhury, Biswa; Andersen, Thomas Levin; Wirnsberger, Gerald; Holmskov, Uffe; Perrimon, Norbert; ?agrovi?, Bojan; Monje, Francisco J; Moeller, Jesper Bonnet; Penninger, Josef M; Nagy, Vanja
A Uniquely Stable Trimeric Model of SARS-CoV-2 Spike Transmembrane Domain.
Aliper, Elena T; Krylov, Nikolay A; Nolde, Dmitry E; Polyansky, Anton A; Efremov, Roman G
Compositional complementarity between genomic RNA and coat proteins in positive-sense single-stranded RNA viruses.
Adlhart, Marlene; Poetsch, Florian; Hlevnjak, Mario; Hoogmoed, Megan; Polyansky, Anton A; Zagrovic, Bojan
Unlocking the Hydrolytic Mechanism of GH92 α-1,2-Mannosidases: Computation Inspires the use of C-Glycosides as Michaelis Complex Mimics.
Alonso-Gil, Santiago; Parkan, Kamil; Kaminský, Jakub; Pohl, Radek; Miyazaki, Takatsugu
Structural and mechanistic insights into the substrate specificity and hydrolysis of GH31 ?-N-acetylgalactosaminidase.
Miyazaki, Takatsugu; Ikegaya, Marina; Alonso-Gil, Santiago
POSTAR3: an updated platform for exploring post-transcriptional regulation coordinated by RNA-binding proteins.
Zhao, Weihao; Zhang, Shang; Zhu, Yumin; Xi, Xiaochen; Bao, Pengfei; Ma, Ziyuan; Kapral, Thomas H; Chen, Shuyuan; Zagrovic, Bojan; Yang, Yucheng T; Lu, Zhi John
MonteCarbo: A software to generate and dock multifunctionalized ring molecules.
Alonso-Gil, Santiago
Order from disorder in the sarcomere: FATZ forms a fuzzy but tight complex and phase-separated condensates with α-actinin.
Sponga, Antonio; Arolas, Joan L; Schwarz, Thomas C; Jeffries, Cy M; Rodriguez Chamorro, Ariadna; Kostan, Julius; Ghisleni, Andrea; Drepper, Friedel; Polyansky, Anton; De Almeida Ribeiro, Euripedes; Pedron, Miriam; Zawadzka-Kazimierczuk, Anna; Mlynek, Georg; Peterbauer, Thomas; Doto, Pierantonio; Schreiner, Claudia; Hollerl, Eneda; Mateos, Borja; Geist, Leonhard; Faulkner, Georgine; Kozminski, Wiktor; Svergun, Dmitri I; Warscheid, Bettina; Zagrovic, Bojan; Gautel, Mathias; Konrat, Robert; Djinovi?-Carugo, Kristina
RNA polymerase II-binding aptamers in human ACRO1 satellites disrupt transcription in cis
Boots, Jennifer L; von Pelchrzim, Frederike; Weiss, Adam; Zimmermann, Bob; Friesacher, Theres; Radtke, Maximilian; Zywicki, Marek; Chen, Doris; Matylla-Kuli?ska, Katarzyna; Zagrovic, Bojan; Schroeder, Renée
Frameshifting preserves key physicochemical properties of proteins.
Bartonek, Lukas; Braun, Daniel; Zagrovic, Bojan
Direct interplay between stereochemistry and conformational preferences in aminoacylated oligoribonucleotides.
Polyansky, Anton A; Kreuter, Mathias; Sutherland, John D; Zagrovic, Bojan
Configurational Entropy Components and Their Contribution to Biomolecular Complex Formation.
Fleck, Markus; Zagrovic, Bojan
VOLPES: an interactive web-based tool for visualizing and comparing physicochemical properties of biological sequences.
Bartonek, Lukas; Zagrovic, Bojan
Atomistic mechanism of the constitutive activation of PDGFRA via its transmembrane domain.
Polyansky, Anton A; Bocharov, Eduard V; Velghe, Amélie I; Kuznetsov, Andrey S; Bocharova, Olga V; Urban, Anatoly S; Arseniev, Alexander S; Zagrovic, Bojan; Demoulin, Jean-Baptiste; Efremov, Roman G
RNA-protein interactions in an unstructured context.
Zagrovic, Bojan; Bartonek, Lukas; Polyansky, Anton A
Phage therapy for treating bacterial infections: a double-edged sword
Suckers and segments of the octopus arm
Using the house mouse radiation to study the rapid evolution of genes and genetic processes
CRISPR jumps ahead: mechanistic insights into CRISPR-associated transposons
SLiMs and SHelMs: Decoding how short linear and helical motifs direct PPP specificity to direct signaling
Title to be announced
Enigmatic evolutionary origin and multipotency of the neural crest cells - major drivers of vertebrate evolution
Visualising mitotic chromosomes and nuclear dynamics by correlative light and electron microscopy
Engineered nanocarriers for imaging of small proteins by CryoEM
Bacterial cell envelope homeostasis at the (post)transcriptional level
Title to be announced
Hydrologic extremes alter mechanisms and pathways of carbon export from mountainous floodplain soils
Dissecting post-transcriptional gene expression regulation in humans and viruses
Polyploidy and rediploidisation in stressful times
Prdm9 control of meiotic synapsis of homologs in intersubspecific hybrids
Title to be announced
RNA virus from museum specimens
Programmed DNA double-strand breaks during meiosis: Mechanism and evolution
Title to be announced