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Cells don’t just “make proteins”. They translate genetic information into proteomes that are tuned to cell identity, developmental stage, and environmental conditions. This requires tight control of translational output and fidelity in the face of changing demands. We aim to define the principles that keep translation robust under these shifting conditions.
We focus on three connected questions: how gene expression machines are assembled into functional systems; how translational disturbances are sensed and contained; and how defective or surplus components are removed to maintain homeostasis. A central theme is context dependence: why the same perturbation is buffered in some cell states, but leads to marked proteostasis defects in others.
We study defined human cell states and analyse what happens when translation is pushed off balance. We use hiPSCs and differentiated lineages to compare translational regulation and quality control across contexts. Using scalable genetic perturbations and quantitative readouts, we track how cells reshape translation output, engage quality control pathways, and recover proteome integrity or undergo proteostasis collapse. Key findings are followed up mechanistically with targeted genetics and biochemical experiments to connect phenotypes to underlying molecular events.
Danny Nedialkova obtained her PhD in molecular virology from Leiden University (The Netherlands) and carried out postdoctoral research at the Max Planck Institute for Molecular Biomedicine (Germany). In 2017, she established her independent group at the Max Planck Institute of Biochemistry and was jointly appointed as a tenure-track assistant professor at the Technical University of Munich. In 2025, she was promoted to a tenured associate professor in the Department of Bioscience at TUM. In 2026, she joined the Max Perutz Labs and Medical University of Vienna as professor of biochemistry.
High-resolution quantitative profiling of tRNA abundance and modification status in eukaryotes by mim-tRNAseq.
Behrens Andrew, Rodschinka Geraldine, Nedialkova Danny D
Experimental and computational workflow for the analysis of tRNA pools from eukaryotic cells by mim-tRNAseq.
Behrens Andrew, Nedialkova Danny D
RNF14-dependent atypical ubiquitylation promotes translation-coupled resolution of RNA-protein crosslinks.
Zhao Shubo, Cordes Jacqueline, Caban Karolina M, Götz Maximilian J, Mackens-Kiani Timur, Veltri Anthony J, Sinha Niladri K, Weickert Pedro, Kaya Selay, Hewitt Graeme, Nedialkova Danny D, Fröhlich Thomas, Beckmann Roland, Buskirk Allen R, Green Rachel, Stingele Julian
Selective gene expression maintains human tRNA anticodon pools during differentiation.
Gao Lexi, Behrens Andrew, Rodschinka Geraldine, Forcelloni Sergio, Wani Sascha, Strasser Katrin, Nedialkova Danny D
The dynamics and functional impact of tRNA repertoires during early embryogenesis in zebrafish.
Reimão-Pinto Madalena M, Behrens Andrew, Forcelloni Sergio, Fröhlich Klemens, Kaya Selay, Nedialkova Danny D
Correcting a pathogenic mitochondrial DNA mutation by base editing in mice.
Barrera-Paez Jose D, Bacman Sandra R, Balla Till, Van Booven Derek, Gannamedi Durga P, Stewart James B, Mok Beverly, Liu David R, Lombard David B, Griswold Anthony J, Nedialkova Danny D, Moraes Carlos T
ADAT3 variants disrupt the activity of the ADAT tRNA deaminase complex and impair neuronal migration.
Del-Pozo-Rodriguez Jordi, Tilly Peggy, Lecat Romain, Vaca Hugo Rolando, Mosser Laureline, Brivio Elena, Balla Till, Gomes Marina Vitoria, Ramos-Morales Elizabeth, Schwaller Noémie, Salinas-Giegé Thalia, VanNoy Grace, England Eleina M, Kern Lovgren Alysia, O'Leary Melanie, Chopra Maya, Meave Ojeda Naomi, Toosi Mehran Beiraghi, Eslahi Atieh, Alerasool Masoome, Mojarrad Majid, Pais Lynn S, Yeh Rebecca C, Gable Dustin L, Hashem Mais O, Abdulwahab Firdous, Rakiz Alqurashi Muath, Sbeih Loai Z, Adas Blanco Omar Abu, Khater Renad Abu, Oprea Gabriela, Rad Aboulfazl, Alzaidan Hamad, Aldhalaan Hesham, Tous Ehab, Alsagheir Afaf, Alowain Mohammed, Tamim Abdullah, Alfayez Khowlah, Alhashem Amal, Alnuzha Aisha, Kamel Mona, Al-Awam Bashayer S, Elnaggar Walaa, Almenabawy Nihal, O'Donnell-Luria Anne, Neil Jennifer E, Gleeson Joseph G, Walsh Christopher A, Alkuraya Fowzan S, AlAbdi Lama, Elkhateeb Nour, Selim Laila, Srivastava Siddharth, Nedialkova Danny D, Drouard Laurence, Romier Christophe, Bayam Efil, Godin Juliette D
Comparative CRISPRi screens reveal a human stem cell dependence on mRNA translation-coupled quality control.
Rodschinka Geraldine, Forcelloni Sergio, Kühner Felix M, Wani Sascha, Riemenschneider Henrick, Edbauer Dieter, Behrens Andrew, Nedialkova Danny D
Altered translation elongation contributes to key hallmarks of aging in the killifish brain.
Di Fraia Domenico, Marino Antonio, Lee Jae Ho, Kelmer Sacramento Erika, Baumgart Mario, Bagnoli Sara, Balla Till, Schalk Felix, Kamrad Stephan, Guan Rui, Caterino Cinzia, Giannuzzi Chiara, Tomaz da Silva Pedro, Sahu Amit Kumar, Gut Hanna, Siano Giacomo, Tiessen Max, Terzibasi-Tozzini Eva, Fornasiero Eugenio F, Gagneur Julien, Englert Christoph, Patil Kiran R, Correia-Melo Clara, Nedialkova Danny D, Frydman Judith, Cellerino Alessandro, Ori Alessandro
Translon: a single term for translated regions.
Świrski Michał I, Tierney Jack A S, Albà M Mar, Andreev Dmitry E, Aspden Julie L, Atkins John F, Bassani-Sternberg Michal, Berry Marla J, Biffo Stefano, Boris-Lawrie Kathleen, Borodovsky Mark, Brierley Ian, Brook Matthew, Brunet Marie A, Bujnicki Janusz M, Caliskan Neva, Calviello Lorenzo, Carvunis Anne-Ruxandra, Cate Jamie H D, Cenik Can, Chang Kung Yao, Chen Yiwen, Chothani Sonia, Choudhary Jyoti S, Clark Patricia L, Clauwaert Jim, Cooley Lynn, Dassi Erik, Dean Kellie, Diaz Jean-Jacques, Dieterich Christoph, Dikstein Rivka, Dinman Jonathan D, Dmitriev Sergey E, Dontsova Olga A, Dunham Christine M, Eswarappa Sandeep M, Farabaugh Philip J, Faridi Pouya, Fierro-Monti Ivo, Firth Andrew E, Gatfield David, Gebauer Fátima, Gelfand Mikhail S, Gray Nicola K, Green Rachel, Hill Chris H, Hou Ya-Ming, Hübner Norbert, Ignatova Zoya, Ivanov Pavel, Iwasaki Shintaro, Johnson Rory, Jomaa Ahmad, Jovanovic Marko, Jungreis Irwin, Kellis Manolis, Kieft Jeffrey S, Kochetov Alex V, Koonin Eugene V, Korostelev Andrei A, Kufel Joanna, Kulakovskiy Ivan V, Kurian Leo, Lafontaine Denis L J, Larsson Ola, Loughran Gary, Lukeš Julius, Mariotti Marco, Martens-Uzunova Elena S, Martinez Thomas F, Matsumoto Akinobu, McManus Joel, Medenbach Jan, Melnikov Sergey V, Menschaert Gerben, Merchante Catharina, Mikl Martin, Miller W Allen, Mühlemann Oliver, Namy Olivier, Nedialkova Danny D, Nosek Jozef, Orchard Sandra, Ozretić Petar, Pertea Mihaela, Pervouchine Dmitri D, Romão Luísa, Ron David, Roucou Xavier, Rubtsova Maria P, Ruiz-Orera Jorge, Saghatelian Alan, Salzberg Steven L, Seale Lucia A, Seoighe Cathal, Sergiev Petr V, Shah Premal, Shirokikh Nikolay, Slavoff Sarah A, Sonenberg Nahum, Stasevich Timothy J, Szczesny Roman J, Tamm Tiina, Tchórzewski Marek, Topisirovic Ivan, Tremblay Michel L, Tuller Tamir, Ulitsky Igor, Valášek Leoš Shivaya, Van Damme Petra, Viero Gabriella, Vizcaino Juan Antonio, Vogel Christine, Wallace Edward W J, Weissman Jonathan S, Westhof Eric, Whiffin Nicola, Wilson Daniel N, Xie Zhi, Yewdell Jonathan W, Yordanova Martina M, Yu Chien-Hung, Yurchenko Vyacheslav, Zagrovic Bojan, Valen Eivind, Baranov Pavel V

