Learning From an Artificial Neural Network in Phylogenetics.
Leuchtenberger, Alina F; von Haeseler, Arndt
MultiMatch: Geometry-Informed Colocalization in Multi-Color Super-Resolution Microscopy
Julia Naas, Giacomo Nies, Housen Li, Stefan Stoldt, Bernhard Schmitzer, Stefan Jakobs, Axel Munk
Parallel Inference of Phylogenetic Stands with Gentrius
Anastasis Togkousidis; Olga Chernomor; Alexandros Stamatakis
Gentrius: identifying equally scoring trees in phylogenomics with incomplete data
Olga Chernomor, Christiane Elgert, Arndt von Haeseler
Critical Growth of Cerebral Tissue in Organoids: Theory and Experiments.
Kiselev, Egor I; Pflug, Florian; von Haeseler, Arndt
Multi-chamber cardioids unravel human heart development and cardiac defects.
Schmidt, Clara; Deyett, Alison; Ilmer, Tobias; Haendeler, Simon; Torres Caballero, Aranxa; Novatchkova, Maria; Netzer, Michael A; Ceci Ginistrelli, Lavinia; Mancheno Juncosa, Estela; Bhattacharya, Tanishta; Mujadzic, Amra; Pimpale, Lokesh; Jahnel, Stefan M; Cirigliano, Martina; Reumann, Daniel; Tavernini, Katherina; Papai, Nora; Hering, Steffen; Hofbauer, Pablo; Mendjan, Sasha
ModelRevelator: Fast phylogenetic model estimation via deep learning.
Burgstaller-Muehlbacher, Sebastian; Crotty, Stephen M; Schmidt, Heiko A; Reden, Franziska; Drucks, Tamara; von Haeseler, Arndt
Long non-coding RNAs contribute to DNA damage resistance in Arabidopsis thaliana.
Durut, Nathalie; Kornienko, Aleksandra E; Schmidt, Heiko A; Lettner, Nicole; Donà, Mattia; Nordborg, Magnus; Scheid, Ortrun Mittelsten
Genome-wide screening in pluripotent cells identifies Mtf1 as a suppressor of mutant huntingtin toxicity.
Ferlazzo, Giorgia Maria; Gambetta, Anna Maria; Amato, Sonia; Cannizzaro, Noemi; Angiolillo, Silvia; Arboit, Mattia; Diamante, Linda; Carbognin, Elena; Romani, Patrizia; La Torre, Federico; Galimberti, Elena; Pflug, Florian; Luoni, Mirko; Giannelli, Serena; Pepe, Giuseppe; Capocci, Luca; Di Pardo, Alba; Vanzani, Paola; Zennaro, Lucio; Broccoli, Vania; Leeb, Martin; Moro, Enrico; Maglione, Vittorio; Martello, Graziano
Hypoxia controls expression of kidney-pathogenic MUC1 variants.
Naas, Stephanie; Krüger, René; Knaup, Karl Xaver; Naas, Julia; Grampp, Steffen; Schiffer, Mario; Wiesener, Michael; Schödel, Johannes
The ADAR1 editome reveals drivers of editing-specificity for ADAR1-isoforms.
Kleinova, Renata; Rajendra, Vinod; Leuchtenberger, Alina F; Lo Giudice, Claudio; Vesely, Cornelia; Kapoor, Utkarsh; Tanzer, Andrea; Derdak, Sophia; Picardi, Ernesto; Jantsch, Michael F
Hypoxia hits APOL1 in the kidney.
Grampp, Steffen; Krüger, René; Lauer, Victoria; Uebel, Sebastian; Knaup, Karl X; Naas, Julia; Höffken, Verena; Weide, Thomas; Schiffer, Mario; Naas, Stephanie; Schödel, Johannes
SVhound: detection of regions that harbor yet undetected structural variation.
Paulin, Luis F; Raveendran, Muthuswamy; Harris, R Alan; Rogers, Jeffrey; von Haeseler, Arndt; Sedlazeck, Fritz J
An ancestral Wnt-Brachyury feedback loop in axial patterning and recruitment of mesoderm-determining target genes.
Schwaiger, Michaela; Andrikou, Carmen; Dnyansagar, Rohit; Murguia, Patricio Ferrer; Paganos, Periklis; Voronov, Danila; Zimmermann, Bob; Lebedeva, Tatiana; Schmidt, Heiko A; Genikhovich, Grigory; Benvenuto, Giovanna; Arnone, Maria Ina; Technau, Ulrich
Gruffi: an algorithm for computational removal of stressed cells from brain organoid transcriptomic datasets.
Vértesy, Ábel; Eichmüller, Oliver L; Naas, Julia; Novatchkova, Maria; Esk, Christopher; Balmaña, Meritxell; Ladstaetter, Sabrina; Bock, Christoph; von Haeseler, Arndt; Knoblich, Juergen A
Molecular archaeology of human cognitive traits.
Kaczanowska, Joanna; Ganglberger, Florian; Chernomor, Olga; Kargl, Dominic; Galik, Bence; Hess, Andreas; Moodley, Yoshan; von Haeseler, Arndt; Bühler, Katja; Haubensak, Wulf
Deep learning from phylogenies to uncover the epidemiological dynamics of outbreaks.
Voznica, J; Zhukova, A; Boskova, V; Saulnier, E; Lemoine, F; Moslonka-Lefebvre, M; Gascuel, O
Comprehensive Analysis of Nasal Polyps Reveals a More Pronounced Type 2 Transcriptomic Profile of Epithelial Cells and Mast Cells in Aspirin-Exacerbated Respiratory Disease.
Bangert, Christine; Villazala-Merino, Sergio; Fahrenberger, Martin; Krausgruber, Thomas; Bauer, Wolfgang M; Stanek, Victoria; Campion, Nicholas James; Bartosik, Tina; Quint, Tamara; Regelsberger, Guenther; Niederberger-Leppin, Verena; Bock, Christoph; Schneider, Sven; Eckl-Dorna, Julia
NMD is required for timely cell fate transitions by fine-tuning gene expression and regulating translation.
Huth, Michelle; Santini, Laura; Galimberti, Elena; Ramesmayer, Julia; Titz-Teixeira, Fabian; Sehlke, Robert; Oberhuemer, Michael; Stummer, Sarah; Herzog, Veronika; Garmhausen, Marius; Romeike, Merrit; Chugunova, Anastasia; Leesch, Friederike; Holcik, Laurenz; Weipoltshammer, Klara; Lackner, Andreas; Schoefer, Christian; von Haeseler, Arndt; Buecker, Christa; Pauli, Andrea; Ameres, Stefan L; Smith, Austin; Beyer, Andreas; Leeb, Martin
Melanopsin elevates locomotor activity during the wake state of the diurnal zebrafish.
Dekens, Marcus P S; Fontinha, Bruno M; Gallach, Miguel; Pflügler, Sandra; Tessmar-Raible, Kristin
Voyage of the Starships: giant transposons as crucibles of evolution
Parthenogenesis, cryptobiosis, and the survival in extreme environmental conditions
Evading ageing: Mitochondrial and proteostatic adaptations in oocytes
Genomes in Rhodnius prolixus symbiotic system
Stem cells, immune evasion and metastasis in colorectal cancer
Ubiquitin & Friends Symposium 2024
The Ubiquitin & Friends Symposium is an annual international meeting taking place in the beautiful capital of Austria, aiming to bring together scholars from various fields studying ubiquitin/Ubl biology and protein degradation in a personal, family-like atmosphere, as suggested by the name.
The evolution and development of mollusc shells
Unraveling the Complexity of Crossover Regulation in C. elegans
Dynamics of 3D Genome Structure and Function
How superworms can help to solve our plastic waste crisis
Title to be announced
New players in an old pathway: biology of methanogens of the TACK superphylum
Shaping morphogen gradients: from molecules to tissues and back
Title to be announced
Studying stressed cells by in situ structural biology
Exploring Microbial Resilience: Unravelling Escherichia coliand#x27;s Stress Response at the Level of Protein Synthesis
Arbuscular mycorrhiza development and function
Deep homology and deep diversity: Evolving genetic toolkits for making and sensing light
The evolution of cell type identity and tissue microecology at the fetal-maternal interface
The unanticipated roles of PICIs and phages in bacterial evolution
Chemical targeting of subcellular protein localization
Origin and diversification of gut-derived organs in chordates
Job's Dilemma for the Genome: Why Bad Things Happen to Good Chromosomes
Connections between carbon and nitrogen cycling in the ocean
Understanding how the DNA-loop-extruding protein complex Condensin folds a chromatinized genome into mitotic chromosomes
DrugMap: A quantitative pan-cancer analysis of cysteine ligandability
From Roads to Rivers? Occurrence and environmental fate of tire and road wear particles and of tire-related chemicals
FENS 2024 Satellite event: Home cage behavior monitoring at the interface of animal welfare and neuroscience
Striking physiology and cell biology of (marine) environmental microorganisms
Mechanisms controlling maintenance of cohesin dependent loops
Title to be announced